N. gaditana genome page

Nannochloropsis gaditanaThe Nannochloropsis gaditana genome project produced a high-quality genome draft, with chromosome scale scaffolds, and an interesting analysis of the transcriptome response to Nitrogen deprivation.

We release our data through a dedicated portal (http://www.nannochloropsis.org/) that features:

  • An FTP area to download both genome and annotation files
  • An online BLAST with links to genome browser
  • A Genome Browser with annotation and transcriptome tracks
  • A Query system to extract gene sets

We also added a blog that we’d like to keep up to date, to better serve the research community that is growing around Nannochloropsis.

About Andrea Telatin

Visiting bioinformatician in the Bioinformatics team, on-contract professor of "Introduction to Bash for bioinformatics". During his PhD he developed a novel scaffolding suite (ScaMPI), that has been used to assemble the genome of N. gaditana. Current research interests span from epigenomic data analysis, genome assembly and finishing, metagenomics.
This entry was posted in Projects and tagged , , , , . Bookmark the permalink.